Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821617.1_cds_XP_016500818.1_14615
CDS Infomation

[gene=LOC107819244] [db_xref=GeneID:107819244] [protein=putative E3 ubiquitin-protein ligase UBR7] [protein_id=XP_016500818.1] [location=complement(join(4844..4933,5034..5681,5992..6252,6797..6955,9910..9990))] [gbkey=CDS]
Sequence

ATGGCTGATGCATTTGAAGAGGAGGCTGATCAGACTGTTTCGATTAATGAGTATCTCGAA
GATCTCGAAGAGCAGGAGCTGGAGGCGGATCTGGTCTTAGGTGGTGATGAAGGCAAGGAG
TGCACCTATAGTAAAGGTTATATGAAGAGACAAGCTATTTTTTCTTGTTTGACATGCACA
CCAGATGGGAACGCTGGGGTTTGCACAGCTTGTAGCCTTTCTTGCCATGATGGTCATGAG
ATTTTGGAACTTTGGACGAAGAGAAACTTTAGGTGTGACTGTGGAAATTCTAAGTTCGGG
GAGTTCTTCTGCAAGCTTGATGCTAGCAAAGATGTTGAAAACACGAAGAATTCATATAAT
CACAATTTCAAAGGTTCATACTGCACATGTTGCCGGCCATATCCTGATCCTGATGTTGAA
GACCAATTGGAGAATCTCCAATGCTGCATCTGTGAGGACTGGTTTCACGAGGAGCATCTT
GGTCTTGAGTCCTCTGATATGATTCCAAGGGATGAAAATGGGGAGCCTCTATTTGAGGAT
TTAATCTGCCAGGGATGTGCAGCTATTTGTTCTTTTCTAAACCTATATCCTCATTCTATT
TTTGCACCGGTTCAGCAGCACACTGCTACAAACTCTTTGAAGAACAAGGAGGTGGTTGAA
GATGCATCCTCGACTGTGGGATCTTCTGAGGAGCTTAACGATGGAAGTTCCTCAATTGAG
ACTCCTGTAACTGAGGATAGTCCTAAAAAAGACACCACCGGGAAGGCTGCTGGAGAAAAC
GTTGCAACAAACACAATTCTGAATCAGTGTAACCAAATTGCTGGTCCTAGTACCAAATGT
GTCCTTGGACTGAACTTGTTAGAAGCTCCAATTCGCCTTGAGAAAAGCAAGCCAATGTTC
CTTTCTAACGACTGGAGAGAAATTCTCTGTAGGTGTCCAAATTGCACAGAATTCTACAAA
CAGAAAGGGCTTGCCTTCTTACTTGAAAAAGAGGATACAATTGCAGAATATGAGAAAATG
GCAAAACAGAAGAGAGCTCAACATGAGCAAGAACGTAGTGCTGAGATGCTTAATAAACTG
GGCCACGTTGGGAAAATGGAGGTTTTGACTGGCATCGCTGACCTTAAAGACGAGATCGGT
AATTACCTGGCATCCTTCGATCCATCAAAGCCAGTTACATCTGCTGACGTTCATAAGATT
TTTGAGAATCTTGCCCAGAAGCGCAGGCGTATGACTTAA

Peptide Sequence

PEP ID

XP_016500818.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Nicotiana tabacum]
Sequence

MADAFEEEADQTVSINEYLEDLEEQELEADLVLGGDEGKECTYSKGYMKRQAIFSCLTCT
PDGNAGVCTACSLSCHDGHEILELWTKRNFRCDCGNSKFGEFFCKLDASKDVENTKNSYN
HNFKGSYCTCCRPYPDPDVEDQLENLQCCICEDWFHEEHLGLESSDMIPRDENGEPLFED
LICQGCAAICSFLNLYPHSIFAPVQQHTATNSLKNKEVVEDASSTVGSSEELNDGSSSIE
TPVTEDSPKKDTTGKAAGENVATNTILNQCNQIAGPSTKCVLGLNLLEAPIRLEKSKPMF
LSNDWREILCRCPNCTEFYKQKGLAFLLEKEDTIAEYEKMAKQKRAQHEQERSAEMLNKL
GHVGKMEVLTGIADLKDEIGNYLASFDPSKPVTSADVHKIFENLAQKRRRMT

Transcript Sequence

Gene sequence data has not been registered.